Single Cell & Transcriptomics Core

 

Effective 01/06/2024

 

RUSH options will not be available

 

If you have upcoming deadlines, please contact Emanuele Palescandolo, directly

 

to see if your timing needs can be met. 

 

 Join our NEW Single Cell list serve! 

 

Email: sympa@lists.johnshopkins.edu with subject line: subscribe

SingleCell Firstname Lastname

 

 

 

Overview of Services

Our aim is to provide cost-effective and time-efficient access to cutting-edge genomic technologies and expert assistance with experimental design and data analysis. The Core has been in continuous operation since 2002 and has supported research projects for more than 467 principal investigators, 1097 individual researchers, and processed more than 36,000 samples (as tallied in April 2016). We offer sample preparation and analysis using Next Generation & Third Generation sequencing technologies, and qPCR.  We also offer high throughput DNA, Chromatin, and RNA shearing using the Covaris E220 system. Our lab is equipped with the Illumina NextSeq 500, MiSeq, and iSeq next-generation sequencer for short reads. We work closely with the ECGC to enable our clients access to the NovaSeq for deeper sequencing requirements. We ensure a full-service experience for our clients, starting with project design, all the way through publication. We encourage our clients to meet with us before beginning any projects to ensure the most accurate and efficient results. From nucleic acid extraction through analysis, we are your one-stop-shop.  

 

Core Publications List

Leadership

 

Seth Blackshaw, Ph.D., Faculty Director

MRB Room 339
Email: sethblackshaw@gmail.com 

 

Emanuele Palescandolo, Ph.D., Director

MRB Room 359
Email: epalesc1@jh.edu

 

BJ Savoy, MBA, CPA, Finance Director

410.502.3071
Email: bjsavoy@jhu.edu

 

Location and hours of operation

Hours Location

Hours Open: Monday - Friday 8:30am-5:00pm

Hours Fully Staffed: Monday - Friday 8:30am-5:00pm

733 N Broadway
MRB 360
Baltimore, MD 21205

Links and Resources

1. Single Cell & Transcriptomics Core

Contacts

Name Role Phone Email Location
Seth Blackshaw, PhD
Scientific Director
 

 
sethblackshaw@gmail.com
 
MRB Room 335
 
Jasmeet Sethi, PhD
Bulk Sequencing specialist
 
443-287-8852
 
jsethi1@jhmi.edu
 
MRB Room 355
 
Conover Talbot Jr., BS
Bioinformatician
 
410-614-0443
 
cct@jhmi.edu
 
MRB Room 353
 
Jongseok Lee, PhD
Single Cell Sequencing Specialist (DNA)
 

 
jlee243@jhmi.edu
 
MRB Room 360
 
BJ Savoy, MBA, CPA
Finance Director
 
410-502-3071
 
bjsavoy@jhu.edu
 

 
Emanuele Palescandolo
Director
 
410-502-6658
 
epalesc1@jh.edu
 
MRB 359
 

Price list


Search available services: View: by category alphabetically
Data Analysis (3)
Library Prep (26)
Nanostring (3)
Nucleic Acid Extraction (7)
Quality Control (9)
Sequencing (19)
Shearing (4)
Single Cell Sequencing (32)

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